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Generated on: 04-02-25 01:17:13
| Studies | Unique Samples per Visibility Status | Public Samples per Data Type | Users | Jobs |
|---|---|---|---|---|
|
public: 831 private: 177 sandbox: 2,768 submitted to EBI: 914 |
public: 411,466 private: 121,006 sandbox: 606,529 submitted to EBI: 343,131 submitted to EBI (prep): 397,952 |
16S: 374,261 18S: 12,149 ITS: 14,649 Metagenomic: 68,280 Full Length Operon: 803 Metatranscriptomic: 26,395 Metabolomic: 1,545 Genome Isolate: 1,131 |
14,401 | 844,627 |
Check out this random public study from the database!
Association of distinct gut microbiome patterns with consensus molecular subtypes of colorectal cancer
For the study, colorectal cancer tumour samples were collected from 34 patients and transcriptome sequencing of the samples was done to classify them into consensus molecular subtypes of colorectal cancer. To quantify relative abundances of bacterial strains in the samples, 16S rRNA amplicon metabarcoding was done and the non-human part of the transcriptome data was also analysed. Analysis of the association between the subtypes and microbiome was carried on and the targeted quantitative PCR was done to confirm the findings.
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